Data Sets

YosefLab/Thymus_CITE-seq: Thymus_CITE-seq Reproducibility

Single-cell multi-omic analysis of thymocyte development reveals drivers of CD4/CD8 lineage commitment

This repository contains code for the analysis performed in this manuscript.

Vision - Thymus CITE-seq All Data

Vision - Thymus CITE-seq Positive Selection

Visium Thymus - 3 weeks, B6 WT

Space Ranger output for an uninfected B6 WT thymus at 3 weeks. Click here to download a .html file, then open the file to view the analysis in your browser. We have also provided a Loupe Browser file and the filtered data matrix if you wish to view the data in those methods (you will need to have the Loupe Browser installed to open the file).